The Camotes Islands are an archipelago of islands located in the sea of the same name. They're east of Cebu and form part of its province.
Bantayan Island is the main island in a group of small islands. Located north-west of Cebu Island, they're still spared from mass tourism.
Pamilacan is a small island in the middle of the Visayas. It is still very authentic.
Flower Island is a private and virtually deserted island in northern Palawan.
A succession of islands punctuated with lagoons, beaches, karstic cliffs... This archipelago is considered as the most beautiful place ever explored by the sailor, Cousteau.
An island known throughout Southeast Asia for its bustling and idyllic beach which is alive with water sports during the day and with a party atmosphere at night. So here you are in Boracay, for better or for worse.
Lumiang is a cave in which a large number of coffins have been stored. There are several caves in the Sagada area.
Busuanga is the principal island of the Calamian archipelago, generally overlooked by tourists who will only see Coron and a few attractions of interest in the surrounding area. 
From the highest point of the island, you get a breathtaking view over this range of small hills that line Bohol Island.
Badian Island, or even Zaragosa Island, located close to Badian on Cebu Island.
The Puerta Princesa Subterranean River National Park is remarkable. It reunites a set of caves which an underground river travels through, in the heart of a luxurious primary forest. For adventurers.